When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).
Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.
1 2 3 4 5 6 7 8 8A 9 10 11 12 13 14 15 16 17 18 19 G Q Q V K Q S S P S L T V Q E G G I L AE007512 TRAV19*01 F V-REGION gDNA ggc cag caa gtt aaa caa agc tct ... cca tcg ctg act gtt caa gag gga ggg ata ttg AC005938 TRAV19*01 F V-REGION gDNA --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- AE008686 TRAV19*01 F V-REGION gDNA --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- X72906 TRAV19*01 F V-REGION gDNA --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- S IMGT000082 TRAV19*03 F V-REGION gDNA --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- -c- S AF171639 TRAV19*03 F V-REGION cDNA --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- -c- ___________________CDR1-IMGT____________________ 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 I L N C D Y E N D M F D Y F AE007512 TRAV19*01 F V-REGION gDNA atc ctg aat tgt gat tac gag aat gat atg ... ... ... ... ... ... ttt gac tat ttt AC005938 TRAV19*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- --- --- --- AE008686 TRAV19*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- --- --- --- X72906 TRAV19*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- --- --- --- IMGT000082 TRAV19*03 F V-REGION gDNA --- --- --- --- --c --- --- --- --- --- ... ... ... ... ... ... --- --- --- --- AF171639 TRAV19*03 F V-REGION cDNA --- --- --- --- --c --- --- --- --- --- ... ... ... ... ... ... --- --- --- --- _______________C 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 A W Y K K Y P D N S P T L L I S V R S N AE007512 TRAV19*01 F V-REGION gDNA gcc tgg tac aaa aaa tac cct gac aac agc ccc aca ctc ctg ata tcc gta cgc tca aat AC005938 TRAV19*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- AE008686 TRAV19*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- X72906 TRAV19*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- IMGT000082 TRAV19*03 F V-REGION gDNA --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- AF171639 TRAV19*03 F V-REGION cDNA --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DR2-IMGT________________ 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 V D K R E D G R F T V F AE007512 TRAV19*01 F V-REGION gDNA ... ... ... gtg gat aag agg gaa gac ... ... ... ... ... gga aga ttc aca gtt ttc AC005938 TRAV19*01 F V-REGION gDNA ... ... ... --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- --- --- AE008686 TRAV19*01 F V-REGION gDNA ... ... ... --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- --- --- X72906 TRAV19*01 F V-REGION gDNA ... ... ... --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- --- --- L IMGT000082 TRAV19*03 F V-REGION gDNA ... ... ... --- --- --- --- --- --- ... ... ... ... ... --- --- c-- --- --- --- L AF171639 TRAV19*03 F V-REGION cDNA ... ... ... --- --- --- --- --- --- ... ... ... ... ... --- --- c-- --- --- --- 80 81 82 83 84 84A 85 86 87 88 89 90 91 92 93 94 95 96 97 98 L N K S G K H F S L H I T A S Q P E D AE007512 TRAV19*01 F V-REGION gDNA ttg aac aaa agc ggc ... aaa cac ttc tca ctg cac atc aca gcc tcc cag cct gaa gac AC005938 TRAV19*01 F V-REGION gDNA --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- AE008686 TRAV19*01 F V-REGION gDNA --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- X72906 TRAV19*01 F V-REGION gDNA --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- IMGT000082 TRAV19*03 F V-REGION gDNA --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- AF171639 TRAV19*03 F V-REGION cDNA --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- ___CDR3-IMGT____ 99 100 101 102 103 104 105 106 107 T A V Y L C A A G AE007512 TRAV19*01 F V-REGION gDNA aca gca gtg tac ctc tgc gca gca ggt g AC005938 TRAV19*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- - AE008686 TRAV19*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- - X72906 TRAV19*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- - IMGT000082 TRAV19*03 F V-REGION gDNA --- --- --- --- --- --- --- --- --- - AF171639 TRAV19*03 F V-REGION cDNA --- --- --- --- --- --- --- --- ---
This alignment of allele is generated by IMGT/OutilAllele (Mehdi Yousfi, Chantal Ginestoux, Perrine Pégorier and Patrice Duroux).
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